Radiocarbon analysis of soil microbial biomass via direct chloroform extraction

This is a Preprint and has not been peer reviewed. The published version of this Preprint is available: https://doi.org/10.1017/RDC.2023.80. This is version 1 of this Preprint.

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Authors

Kari M Finstad, Erin E Nuccio, Katherine E Grant, Taylor A B Broek, Jennifer Pett-Ridge, Karis Jensen McFarlane 

Abstract

Microbial processing of soil organic matter is a significant driver of C cycling, yet we lack an understanding of what shapes the turnover of this large terrestrial pool. In part, this is due to limited options for accurately identifying the source of C assimilated by microbial communities. Laboratory incubations are the most common method for this; however, they can introduce artifacts due to sample disruption and processing and can take months to produce sufficient CO2 for analysis. We present a biomass extraction method which allows for the direct 14C analysis of microbial biomolecules and compare the results to laboratory incubations. In the upper 50 cm soil depths, the 14C from incubations was indistinguishable from that of extracted microbial biomass. Below 50 cm, the 14C of the biomass was more depleted than that of the incubations, either due to the stimulation of labile C decomposition in the incubations, or the inclusion of biomolecules from non-living cells in the biomass extractions. Our results suggest that measurement of 14C of microbial biomass extracts can be a useful alternative to soil incubations, possibly avoiding some of the drawbacks associated with laboratory incubations.

DOI

https://doi.org/10.31223/X5H952

Subjects

Biogeochemistry

Keywords

Soil microbial biomass, radiocarbon, Soil organic carbon, Soil incubation, Direct chloroform extraction, radiocarbon, Soil organic carbon, soil incubations, direct chloroform extraction

Dates

Published: 2023-04-15 10:12

Last Updated: 2023-04-15 17:12

License

CC-BY Attribution-No Derivatives 4.0 International

Additional Metadata

Conflict of interest statement:
None