Preprints

Filtering by Subject: Life Sciences

Canopy structure explains the relationship between photosynthesis and sun-induced chlorophyll fluorescence in crops

Benjamin Dechant, Youngryel Ryu, Grayson Badgley, et al.

Published: 2019-09-30
Subjects: Agricultural Science, Life Sciences, Physiology, Plant Sciences

Remote sensing of far-red sun-induced chlorophyll fluorescence (SIF) has emerged as an important tool for studying gross primary productivity (GPP) at the global scale. However, the relationship between SIF and GPP at the canopy scale lacks a clear mechanistic explanation. This is largely due to the poorly characterized role of the relative contributions from canopy structure and leaf physiology [...]

Possible Tectonic Impact of Biosphere

Eugene Bagashov

Published: 2019-09-19
Subjects: Environmental Microbiology and Microbial Ecology Life Sciences, Life Sciences, Microbiology

This paper explores the possibility of existence of ultra-deep biosphere (deeper than 10 km under the surface) and the biogenic earthquake hypothesis -- the idea that subsurface microorganisms might be directly related to earthquake activity. The importance of electroautotrophic type of metabolism is underlined, and the role of telluric currents in this process is explored in some detail, as well [...]

Enriching the historical meteorological information using Romanian newspaper reports

Sorin Cheval, Aritina Haliuc, Bogdan Antonescu, et al.

Published: 2019-09-17
Subjects: Life Sciences, Other Life Sciences

This study presents the meteorological information spanning the last two decades of the end of 19th century (1880-1900) extracted from three Romanian newspapers (România Liberă, Gazeta de Transilvania and Foaia Poporului). It describes the characteristics of the newspaper data included in the database, it offers and overview of the meteorological network and climate picture at that time in [...]

Paradoxical impact of sprawling intra-Urban Heat Islets: Reducing mean surface temperatures while enhancing local extremes

Anamika Shreevastava, Saiprasanth Bhalachandran, Gavan McGrath, et al.

Published: 2019-09-09
Subjects: Civil and Environmental Engineering, Earth Sciences, Engineering, Life Sciences, Physical Sciences and Mathematics, Statistics and Probability

Cities are at the forefront of climate change impacts and face a growing burden of adaptation to ensuing natural hazards. Extreme heat is a particularly challenging hazard as persistent heatwaves are locally exacerbated by the Urban Heat Island (UHI) effect. As a result, there is an increasing scientific interest in the influence of diverse urban morphologies on UHI. However, as the temperatures [...]

Accounting for training data error in machine learning applied to Earth observations

Arthur Elmes, Hamed Alemohammad, Ryan Avery, et al.

Published: 2019-08-29
Subjects: Earth Sciences, Engineering, Environmental Monitoring, Environmental Sciences, Life Sciences, Physical Sciences and Mathematics

Remote sensing, or Earth Observation (EO), is increasingly used to understand Earth system dynamics and create continuous and categorical maps of biophysical properties and land cover, especially based on recent advances in machine learning (ML). ML models typically require large, spatially explicit training datasets to make accurate predictions. Training data (TD) are typically generated by [...]

Considering the role of adaptive evolution in models of the ocean and climate system

Ben Ward, Sinead Collins, Stephanie Dutkiewicz, et al.

Published: 2019-08-29
Subjects: Earth Sciences, Ecology and Evolutionary Biology, Life Sciences, Oceanography and Atmospheric Sciences and Meteorology, Physical Sciences and Mathematics

Numerical models have been highly successful in simulating global carbon and nutrient cycles in today’s ocean, together with observed spatial and temporal patterns of chlorophyll and plankton biomass at the surface. With this success has come some confidence in projecting the century-scale response to continuing anthropogenic warming. There is also increasing interest in using such models to [...]

More than planetary-scale feedback self-regulation: A Biological-centred approach to the Gaia Hypothesis

Sergio C Rubin, Michel Crucifix

Published: 2019-08-15
Subjects: Life Sciences, Other Life Sciences

Recent appraisals of the Gaia theory tend to focus on the claim that planetary life is a cybernetic regulator that would self-regulate Earth’s chemistry composition and climate dynamics, following either a weak (biotic and physical processes create feedback loops), or a strong (biological activity control and regulates the physical processes) interpretation of the Gaia hypothesis. Here, we [...]

Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest

Rodrigo de Queiroga Miranda, Rodolfo Luiz Bezerra Nóbrega, Magna Soelma Beserra de Moura, et al.

Published: 2019-08-06
Subjects: Civil and Environmental Engineering, Desert Ecology, Ecology and Evolutionary Biology, Engineering, Environmental Engineering, Forest Management, Forest Sciences, Life Sciences, Plant Sciences, Research Methods in Life Sciences

Leaf Area Index (LAI) models that consider all phenological stages have not been developed for the Caatinga, the largest seasonally dry tropical forest in South America. LAI models that are currently used show moderate to high covariance when compared to in situ data, but they often lack accuracy in the whole spectra of possible values and do not consider the impact that the stems and branches [...]

Comment on Evaristo & McDonnell, Global analysis of streamflow response to forest management

James W Kirchner, Wouter Berghuijs, Scott Allen, et al.

Published: 2019-07-25
Subjects: Earth Sciences, Environmental Sciences, Forest Management, Forest Sciences, Hydrology, Life Sciences, Physical Sciences and Mathematics, Water Resource Management

Forests play a key role in the water cycle, so both planting and removing forests can affect streamflow. In a recent Nature article1, Evaristo and McDonnell used a gradient-boosted-tree model to conclude that streamflow response to forest removal is predominantly controlled by the potential water storage in the landscape, and that removing the worlds forests would contribute an additional 34,098 [...]

A practical approach for estimating the escape ratio of near-infrared solar-induced chlorophyll fluorescence

Yelu Zeng, Grayson Badgley, Benjamin Dechant, et al.

Published: 2019-07-24
Subjects: Life Sciences, Physiology, Plant Sciences

Solar-induced chlorophyll fluorescence (SIF) has emerged as a leading approach for remote sensing of gross primary productivity (GPP). While SIF has an intrinsic, underlying relationship with canopy light capture and light use efficiency, these physiological relationships are obscured by the fact that satellites observe a small and variable fraction of total emitted canopy SIF. Upon emission, [...]

The Baltic TRANSCOAST approach – investigating shallow coasts as terrestrial-marine interface of water and matter fluxes

Manon Janssen, Michael E Böttcher, Martin Brede, et al.

Published: 2019-07-16
Subjects: Biogeochemistry, Biology, Earth Sciences, Environmental Monitoring, Environmental Sciences, Hydrology, Life Sciences, Marine Biology, Oceanography and Atmospheric Sciences and Meteorology, Other Oceanography and Atmospheric Sciences and Meteorology, Other Plant Sciences, Physical Sciences and Mathematics, Plant Sciences, Soil Science

In Baltic TRANSCOAST we study the physical, biogeochemical, and biological processes at the land-ocean interface. The coastal zone is heavily impacted by various human activities as well as by geomorphological and climatic processes – on both the land and the sea side. Land-sea interactions at low lying coastal areas that are often dominated by peatlands, and are a common feature along the Baltic [...]

Neoglacial trends in diatom dynamics from a small alpine lake in the Qinling Mountains of central China

Bo Cheng, Jennifer K Adams, JianHui Chen, et al.

Published: 2019-07-05
Subjects: Geography, Life Sciences, Physical and Environmental Geography, Social and Behavioral Sciences

During the latter stages of the Holocene, and prior to anthropogenic global warming, the Earth underwent a period of cooling called the neoglacial. The neoglacial was associated with declining summer insolation and changes to Earth surface albedo. Although impacts varied globally, in China the neoglacial was generally associated with cooler, more arid climate, which led to renewed permafrost [...]

Information-theoretic Portfolio Decision Model for Optimal Flood Management

Matteo Convertino, Antonio Annis, Fernando Nardi

Published: 2019-06-27
Subjects: Civil and Environmental Engineering, Civil Engineering, Computational Engineering, Earth Sciences, Engineering, Environmental Engineering, Environmental Health and Protection, Environmental Sciences, Geomorphology, Hydraulic Engineering, Hydrology, Life Sciences, Natural Resources and Conservation, Natural Resources Management and Policy, Operations Research, Systems Engineering and Industrial Engineering, Other Civil and Environmental Engineering, Other Engineering, Other Environmental Sciences, Other Physical Sciences and Mathematics, Physical Sciences and Mathematics, Probability, Risk Analysis, Statistics and Probability, Sustainability, Systems Engineering, Water Resource Management

The increasing impact of flooding urges more effective flood management strategies to guarantee sustainable ecosystem development. Recent catastrophes underline the importance of avoiding local flood management, but characterizing large scale basin wide approaches for systemic flood risk management. Here we introduce an information-theoretic Portfolio Decision Model (iPDM) for the optimization of [...]

Decentralized Flood Forecasting Using Deep Neural Networks

Muhammed Sit, Ibrahim Demir

Published: 2019-06-22
Subjects: Civil and Environmental Engineering, Engineering, Environmental Engineering, Life Sciences, Other Life Sciences

Predicting flood for any location at times of extreme storms is a longstanding problem that has utmost importance in emergency management. Conventional methods that aim to predict water levels in streams use advanced hydrological models still lack of giving accurate forecasts everywhere. This study aims to explore artificial deep neural networks performance on flood prediction. While providing [...]

Probing the chemical transformation of seawater-soluble crude oil components during microbial oxidation

Yina Liu, Helen White, Rachel Simister, et al.

Published: 2019-06-18
Subjects: Biogeochemistry, Chemistry, Earth Sciences, Environmental Chemistry, Environmental Sciences, Life Sciences, Microbiology, Oceanography, Oceanography and Atmospheric Sciences and Meteorology, Oil, Gas, and Energy, Physical Sciences and Mathematics

Studies assessing the environmental impacts of oil spills focus primarily on the non-water-soluble components, leaving the fate of the water-soluble fraction (WSF) largely unexplored. We employed untargeted chemical analysis along with biological information to probe the transformation of crude oil WSF in seawater, in the absence of light, in a laboratory experiment. Over a 14-day incubation, [...]

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